Re-run this search with the SEG filter switched off
Re-run this search as BLASTX i.e. nucleotide query
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= TPHA0E03980
(86 letters)
Database: Seq/AA.fsa
114,666 sequences; 53,481,399 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
TPHA0E03980 Chr5 (837161..837421) [261 bp, 86 aa] {ON} Anc_1.8 Y... 172 3e-57
CAGL0B00396g Chr2 complement(24498..24764) [267 bp, 88 aa] {ON} ... 130 8e-41
ZYRO0F18414g Chr6 (1521776..1522039) [264 bp, 87 aa] {ON} simila... 130 9e-41
Kpol_2002.11 s2002 complement(19864..20124) [261 bp, 86 aa] {ON}... 128 4e-40
SAKL0C00528g Chr3 complement(47403..47735) [333 bp, 110 aa] {ON}... 128 8e-40
YCL057C-A Chr3 complement(24032..24325) [294 bp, 97 aa] {ON} MO... 125 1e-38
AFR743W Chr6 (1800868..1801116) [249 bp, 82 aa] {ON} Syntenic ho... 124 1e-38
Smik_3.17 Chr3 complement(25487..25777) [291 bp, 97 aa] {ON} YCL... 123 6e-38
NCAS0B09080 Chr2 (1744147..1744428) [282 bp, 93 aa] {ON} Anc_1.8... 123 6e-38
Suva_3.155 Chr3 complement(233792..234085) [294 bp, 97 aa] {ON} ... 122 1e-37
KLTH0F00550g Chr6 complement(42092..42340) [249 bp, 82 aa] {ON} ... 122 1e-37
TBLA0A04960 Chr1 complement(1220183..1220473) [291 bp, 96 aa] {O... 122 1e-37
Skud_3.6 Chr3 complement(12034..12324) [291 bp, 97 aa] {ON} YCL0... 122 3e-37
Ecym_1010 Chr1 complement(19126..19374) [249 bp, 82 aa] {ON} sim... 121 3e-37
Kwal_33.13016 s33 complement(41816..42064) [249 bp, 82 aa] {ON} ... 117 2e-35
TDEL0C06940 Chr3 (1261913..1262173) [261 bp, 86 aa] {ON} Anc_1.8... 108 2e-32
KNAG0C00250 Chr3 complement(38677..38961) [285 bp, 94 aa] {ON} A... 107 9e-32
KLLA0C00550g Chr3 complement(40901..41149) [249 bp, 82 aa] {ON} ... 107 1e-31
NDAI0A00170 Chr1 complement(13975..14265) [291 bp, 96 aa] {ON} A... 100 1e-28
KAFR0D00170 Chr4 complement(18220..18492) [273 bp, 90 aa] {ON} A... 99 2e-28
KAFR0K01560 Chr11 (324725..327784) [3060 bp, 1019 aa] {ON} Anc_3... 29 1.6
Kwal_55.19561 s55 complement(25934..28582) [2649 bp, 882 aa] {ON... 28 2.0
NCAS0A05270 Chr1 (1042604..1044337) [1734 bp, 577 aa] {ON} 28 3.1
TBLA0A06440 Chr1 complement(1580326..1585398) [5073 bp, 1690 aa]... 28 3.4
Kwal_34.16261 s34 (266378..267358) [981 bp, 327 aa] {ON} YFL011W... 27 8.1
>TPHA0E03980 Chr5 (837161..837421) [261 bp, 86 aa] {ON} Anc_1.8
YCL057C-A
Length = 86
Score = 172 bits (435), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 86/86 (100%), Positives = 86/86 (100%)
Query: 1 MSEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGI 60
MSEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGI
Sbjct: 1 MSEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGI 60
Query: 61 GFGVGRGYSDGDAIFRSAAGLRSTRI 86
GFGVGRGYSDGDAIFRSAAGLRSTRI
Sbjct: 61 GFGVGRGYSDGDAIFRSAAGLRSTRI 86
>CAGL0B00396g Chr2 complement(24498..24764) [267 bp, 88 aa] {ON}
highly similar to uniprot|Q96VH5 Saccharomyces
cerevisiae YCL057ca
Length = 88
Score = 130 bits (327), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 60/84 (71%), Positives = 71/84 (84%)
Query: 3 EQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIGF 62
E+ ++ T +SILNDKWDVVLSNM+VK GLGFGVGVVTS+L FKRR+FPVWLG+GF
Sbjct: 5 EETKAKTVDYTPVRSILNDKWDVVLSNMIVKMGLGFGVGVVTSVLFFKRRSFPVWLGVGF 64
Query: 63 GVGRGYSDGDAIFRSAAGLRSTRI 86
G GRGYS+GDAIFRS AGLRS ++
Sbjct: 65 GAGRGYSEGDAIFRSTAGLRSVKV 88
>ZYRO0F18414g Chr6 (1521776..1522039) [264 bp, 87 aa] {ON} similar
to uniprot|Q96VH5 Saccharomyces cerevisiae YCL057C-A
Length = 87
Score = 130 bits (327), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 65/86 (75%), Positives = 80/86 (93%), Gaps = 1/86 (1%)
Query: 1 MSEQKNNNNLELTSP-KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLG 59
M+EQ+ L++T+P KSILNDKWDVVLSN+LVK+GLGFGVGVV S+L+FKRRAFPVWLG
Sbjct: 1 MAEQQQQAQLQVTAPNKSILNDKWDVVLSNLLVKSGLGFGVGVVASVLIFKRRAFPVWLG 60
Query: 60 IGFGVGRGYSDGDAIFRSAAGLRSTR 85
IGFG+GRGY++GDAIFRSAAGLR+++
Sbjct: 61 IGFGLGRGYAEGDAIFRSAAGLRTSK 86
>Kpol_2002.11 s2002 complement(19864..20124) [261 bp, 86 aa] {ON}
complement(19864..20124) [261 nt, 87 aa]
Length = 86
Score = 128 bits (322), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 60/86 (69%), Positives = 70/86 (81%)
Query: 1 MSEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGI 60
MS+Q + +SILNDKWDVVLSN LVKT LGFG GV+ S++LFKRRAFPVWLGI
Sbjct: 1 MSQQSQELQITSAPTRSILNDKWDVVLSNFLVKTSLGFGAGVLASVILFKRRAFPVWLGI 60
Query: 61 GFGVGRGYSDGDAIFRSAAGLRSTRI 86
GFG+GRGYS+GDAIFRSAAGLR + +
Sbjct: 61 GFGIGRGYSEGDAIFRSAAGLRKSTV 86
>SAKL0C00528g Chr3 complement(47403..47735) [333 bp, 110 aa] {ON}
similar to uniprot|Q96VH5 Saccharomyces cerevisiae
YCL057C-A
Length = 110
Score = 128 bits (322), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 62/84 (73%), Positives = 75/84 (89%), Gaps = 6/84 (7%)
Query: 1 MSEQKNNNNLELTSP-KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLG 59
MSEQ L+++ P KSILNDKWDVVLSN++VKTGLGFG G+V S+LLFKRRAFPVWLG
Sbjct: 29 MSEQ-----LQVSKPNKSILNDKWDVVLSNVVVKTGLGFGAGIVASVLLFKRRAFPVWLG 83
Query: 60 IGFGVGRGYSDGDAIFRSAAGLRS 83
+GFG+GRGY++GDAIFRS+AGLR+
Sbjct: 84 VGFGLGRGYAEGDAIFRSSAGLRT 107
>YCL057C-A Chr3 complement(24032..24325) [294 bp, 97 aa] {ON}
MOS1Mitochondrial protein essential for proper inner
membrane organization; conserved component of the
mitochondrial inner membrane organizing system (MICOS,
MINOS, or MitOS), a scaffold-like structure on the
intermembrane space side of the inner membrane which
has a role in the maintenance of crista junctions and
inner membrane architecture; ortholog of human MINOS1
Length = 97
Score = 125 bits (313), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 11/97 (11%)
Query: 1 MSEQKNNNNLELTSPK-----------SILNDKWDVVLSNMLVKTGLGFGVGVVTSILLF 49
MSEQ ++P +IL+ KWD+VLSNMLVKT +GFGVGV TS+L F
Sbjct: 1 MSEQAQTQQPAKSTPSKDSNKNGSSVSTILDTKWDIVLSNMLVKTAMGFGVGVFTSVLFF 60
Query: 50 KRRAFPVWLGIGFGVGRGYSDGDAIFRSAAGLRSTRI 86
KRRAFPVWLGIGFGVGRGY++GDAIFRS+AGLRS+++
Sbjct: 61 KRRAFPVWLGIGFGVGRGYAEGDAIFRSSAGLRSSKV 97
>AFR743W Chr6 (1800868..1801116) [249 bp, 82 aa] {ON} Syntenic
homolog of Saccharomyces cerevisiae YCL057C-A
Length = 82
Score = 124 bits (312), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 58/80 (72%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 7 NNNLELTSP-KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIGFGVG 65
+ LE+++P +SILNDKWDVVLSN++VKTGLGFG GV S+L FKRRAFPVWLG+GFG+G
Sbjct: 2 SGQLEVSAPSRSILNDKWDVVLSNLVVKTGLGFGAGVFASVLFFKRRAFPVWLGVGFGLG 61
Query: 66 RGYSDGDAIFRSAAGLRSTR 85
RGY++GDAIFRS AGLR+ R
Sbjct: 62 RGYAEGDAIFRSHAGLRAVR 81
>Smik_3.17 Chr3 complement(25487..25777) [291 bp, 97 aa] {ON}
YCL057C-A (REAL)
Length = 97
Score = 123 bits (309), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 11/97 (11%)
Query: 1 MSEQKNNNNLELTSPK-----------SILNDKWDVVLSNMLVKTGLGFGVGVVTSILLF 49
MSEQ +P ++L+ KWD+VLSNMLVKT +GFGVGV TS+L F
Sbjct: 1 MSEQAQAQQPAKVTPSKDSSKNGSGVSTVLDTKWDIVLSNMLVKTAMGFGVGVFTSVLFF 60
Query: 50 KRRAFPVWLGIGFGVGRGYSDGDAIFRSAAGLRSTRI 86
KRRAFPVWLGIGFGVGRGY++GDAIFRS+AGLRS+++
Sbjct: 61 KRRAFPVWLGIGFGVGRGYAEGDAIFRSSAGLRSSKV 97
>NCAS0B09080 Chr2 (1744147..1744428) [282 bp, 93 aa] {ON} Anc_1.8
YCL057C-A
Length = 93
Score = 123 bits (308), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 62/93 (66%), Positives = 70/93 (75%), Gaps = 7/93 (7%)
Query: 1 MSEQKNNNNLELTSP-------KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRA 53
MS N N TS +SILNDKWDVVLSNMLVK GLGF VGVV S++ FKRR
Sbjct: 1 MSTDNNPNQSTPTSTAVTPTIDRSILNDKWDVVLSNMLVKVGLGFSVGVVASVIFFKRRT 60
Query: 54 FPVWLGIGFGVGRGYSDGDAIFRSAAGLRSTRI 86
FPVWLGIGFGVGRGY++GDAIFRS AGLR+ ++
Sbjct: 61 FPVWLGIGFGVGRGYAEGDAIFRSPAGLRTAKV 93
>Suva_3.155 Chr3 complement(233792..234085) [294 bp, 97 aa] {ON}
YCL057C-A (REAL)
Length = 97
Score = 122 bits (307), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 55/85 (64%), Positives = 71/85 (83%)
Query: 2 SEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIG 61
S N+N ++ ++L+ KWD+VLSNMLVKT +GFG+GV TS+L FKRRAFP WLGIG
Sbjct: 13 STPSTNSNENGSAVSTVLDAKWDIVLSNMLVKTAMGFGIGVFTSVLFFKRRAFPAWLGIG 72
Query: 62 FGVGRGYSDGDAIFRSAAGLRSTRI 86
FGVGRGY++GDAIFRS+AGLRS+++
Sbjct: 73 FGVGRGYAEGDAIFRSSAGLRSSKV 97
>KLTH0F00550g Chr6 complement(42092..42340) [249 bp, 82 aa] {ON}
similar to uniprot|Q96VH5 Saccharomyces cerevisiae
YCL057C-A
Length = 82
Score = 122 bits (305), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 58/85 (68%), Positives = 73/85 (85%), Gaps = 4/85 (4%)
Query: 1 MSEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGI 60
MSEQ + + +S+LNDKWDVVLSN++VKTGLGFG GVV S+LLFKRRAFPVW+G+
Sbjct: 1 MSEQLKVS----PTSRSLLNDKWDVVLSNLVVKTGLGFGAGVVASVLLFKRRAFPVWIGV 56
Query: 61 GFGVGRGYSDGDAIFRSAAGLRSTR 85
GFG+GRGY++GDAIFRS+AGLR+ +
Sbjct: 57 GFGLGRGYAEGDAIFRSSAGLRTVK 81
>TBLA0A04960 Chr1 complement(1220183..1220473) [291 bp, 96 aa]
{ON} Anc_1.8 YCL057C-A
Length = 96
Score = 122 bits (307), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 12 LTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIGFGVGRGYSDG 71
+TS +SILNDKWD+V+SNMLVKT GFG GV+ S++ FKRRAFPVWLG+GFG+GRGYS+G
Sbjct: 22 VTSNRSILNDKWDIVISNMLVKTTFGFGAGVLASVIFFKRRAFPVWLGVGFGLGRGYSEG 81
Query: 72 DAIFRSAAGLRSTRI 86
DAIFRS AGLRS ++
Sbjct: 82 DAIFRSTAGLRSFQV 96
>Skud_3.6 Chr3 complement(12034..12324) [291 bp, 97 aa] {ON}
YCL057C-A (REAL)
Length = 97
Score = 122 bits (305), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 56/85 (65%), Positives = 72/85 (84%)
Query: 2 SEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIG 61
S N++ ++ +IL+ KWD+V+SNMLVKT +GFGVGV TS+L FKRRAFPVWLGIG
Sbjct: 13 STSSNDSIKNGSAVSTILDAKWDIVMSNMLVKTAMGFGVGVFTSVLFFKRRAFPVWLGIG 72
Query: 62 FGVGRGYSDGDAIFRSAAGLRSTRI 86
FGVGRGY++GDAIFRS+AGLRS+++
Sbjct: 73 FGVGRGYAEGDAIFRSSAGLRSSKV 97
>Ecym_1010 Chr1 complement(19126..19374) [249 bp, 82 aa] {ON}
similar to Ashbya gossypii AFR743W
Length = 82
Score = 121 bits (303), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 57/79 (72%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
Query: 8 NNLELTSP-KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIGFGVGR 66
LE+ +P +SILNDKWDVVLSN++VK GLGF VGV+ S+L FKRRAFPVWLGIGFG+GR
Sbjct: 3 EKLEVAAPSRSILNDKWDVVLSNLVVKAGLGFSVGVLASVLFFKRRAFPVWLGIGFGLGR 62
Query: 67 GYSDGDAIFRSAAGLRSTR 85
GY++GDAIFRS AGLR+ +
Sbjct: 63 GYAEGDAIFRSHAGLRTMK 81
>Kwal_33.13016 s33 complement(41816..42064) [249 bp, 82 aa] {ON}
YCL057C-A - Hypothetical ORF, has similarity to
proteins in S. pombe, C. elegans, D. melanogaster.
[contig 123] FULL
Length = 82
Score = 117 bits (292), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 53/70 (75%), Positives = 65/70 (92%)
Query: 16 KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIGFGVGRGYSDGDAIF 75
+S+LNDKWDVVLSN++VK GLGFG GVV S+LLFKRRA PVW+G+GFG+GRGYS+GDAIF
Sbjct: 12 RSLLNDKWDVVLSNLVVKVGLGFGAGVVASVLLFKRRAAPVWIGVGFGLGRGYSEGDAIF 71
Query: 76 RSAAGLRSTR 85
RS+AGLR+ +
Sbjct: 72 RSSAGLRTVK 81
>TDEL0C06940 Chr3 (1261913..1262173) [261 bp, 86 aa] {ON} Anc_1.8
YCL057C-A
Length = 86
Score = 108 bits (271), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/86 (77%), Positives = 77/86 (89%), Gaps = 2/86 (2%)
Query: 1 MSEQKNNNNLELTSP-KSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLG 59
MSE K+ L++ +P +SILNDKWDVVLSNMLVKTGLGFGVGVV S+L FKRRAFPVWLG
Sbjct: 1 MSE-KSQAQLQVAAPSRSILNDKWDVVLSNMLVKTGLGFGVGVVGSVLFFKRRAFPVWLG 59
Query: 60 IGFGVGRGYSDGDAIFRSAAGLRSTR 85
IGFG+GRGY++GDAIFRSAAGLRS +
Sbjct: 60 IGFGLGRGYAEGDAIFRSAAGLRSVK 85
>KNAG0C00250 Chr3 complement(38677..38961) [285 bp, 94 aa] {ON}
Anc_1.8 YCL057C-A
Length = 94
Score = 107 bits (268), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 61/85 (71%), Positives = 73/85 (85%)
Query: 2 SEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIG 61
+ Q NN L +S+LNDKWDVVLSNMLVK G+GFGVGVVTS+LLF+RRAFPVWLGIG
Sbjct: 10 ATQNNNGQLATKIDRSLLNDKWDVVLSNMLVKVGMGFGVGVVTSVLLFRRRAFPVWLGIG 69
Query: 62 FGVGRGYSDGDAIFRSAAGLRSTRI 86
FGVGRGYS+GDAIFRS +G+R+ ++
Sbjct: 70 FGVGRGYSEGDAIFRSTSGIRTVKV 94
>KLLA0C00550g Chr3 complement(40901..41149) [249 bp, 82 aa] {ON}
similar to uniprot|Q96VH5 Saccharomyces cerevisiae
YCL057C-A
Length = 82
Score = 107 bits (266), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 1 MSEQKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGI 60
MSEQ + SIL+ +WDVVLSN++ KT LG GVG+V S+L FKRRAFPVW+G+
Sbjct: 1 MSEQVQTTK----AVPSILDKRWDVVLSNVVAKTALGAGVGIVASVLFFKRRAFPVWVGV 56
Query: 61 GFGVGRGYSDGDAIFRSAAGLR 82
GFG+GRGY++GDAIFR+ AGLR
Sbjct: 57 GFGLGRGYAEGDAIFRTNAGLR 78
>NDAI0A00170 Chr1 complement(13975..14265) [291 bp, 96 aa] {ON}
Anc_1.8 YCL057C-A
Length = 96
Score = 99.8 bits (247), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/96 (64%), Positives = 71/96 (73%), Gaps = 10/96 (10%)
Query: 1 MSEQKNNNNLE----------LTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFK 50
MSEQ N + T KSILNDKWD+VLSN LVK GLGFGVGVVTS++ FK
Sbjct: 1 MSEQVNKTEHQNAVAPPQQQLATIDKSILNDKWDIVLSNTLVKVGLGFGVGVVTSVIFFK 60
Query: 51 RRAFPVWLGIGFGVGRGYSDGDAIFRSAAGLRSTRI 86
RR FPVWLGIGFG GRGY++GDAIFRS+AG+RS +
Sbjct: 61 RRTFPVWLGIGFGAGRGYAEGDAIFRSSAGIRSVNV 96
>KAFR0D00170 Chr4 complement(18220..18492) [273 bp, 90 aa] {ON}
Anc_1.8 YCL057C-A
Length = 90
Score = 99.4 bits (246), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/83 (72%), Positives = 72/83 (86%), Gaps = 4/83 (4%)
Query: 4 QKNNNNLELTSPKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWLGIGFG 63
+ +NN+++ +SILNDKWD+VLSNMLVK GLGFGVGVVTS++ FKRRAFPVWLGIG+G
Sbjct: 12 EYSNNSID----RSILNDKWDLVLSNMLVKVGLGFGVGVVTSVIFFKRRAFPVWLGIGYG 67
Query: 64 VGRGYSDGDAIFRSAAGLRSTRI 86
GR YS+GDAIFRS AGLRS +I
Sbjct: 68 FGRAYSEGDAIFRSNAGLRSVQI 90
>KAFR0K01560 Chr11 (324725..327784) [3060 bp, 1019 aa] {ON}
Anc_3.433 YGR094W
Length = 1019
Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 5 KNNNNLELTSPKSILNDKWDVVL 27
KN +LEL SP S+L WD++
Sbjct: 572 KNTEDLELFSPYSLLETGWDILF 594
>Kwal_55.19561 s55 complement(25934..28582) [2649 bp, 882 aa] {ON}
YPR194C (OPT2) - oligopeptide transporter [contig 159]
FULL
Length = 882
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 15 PKSILNDKWDVVLSNMLVKTGLGFGVGVVTSILLFKRRAFPVWL 58
PK I ND + ++ + L+ +G GV F RR +P WL
Sbjct: 728 PKKIFNDVYPIMRWSWLIGACIGLFFGVWRK---FFRRYYPTWL 768
>NCAS0A05270 Chr1 (1042604..1044337) [1734 bp, 577 aa] {ON}
Length = 577
Score = 27.7 bits (60), Expect = 3.1, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 5/26 (19%)
Query: 36 LGFGVGVVTSILLFKRRAFPVWLGIG 61
+G G+GVV +I+ AF VW+GIG
Sbjct: 387 IGTGIGVVVAII-----AFGVWIGIG 407
>TBLA0A06440 Chr1 complement(1580326..1585398) [5073 bp, 1690 aa]
{ON} Anc_5.453 YDR379W
Length = 1690
Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 2 SEQKNNNNLELTSPKSILN 20
S +KNNNNL T+ KS+LN
Sbjct: 727 SMEKNNNNLSHTNSKSLLN 745
>Kwal_34.16261 s34 (266378..267358) [981 bp, 327 aa] {ON} YFL011W
(HXT10) - high-affinity hexose transporter [contig 460]
PARTIAL
Length = 327
Score = 26.6 bits (57), Expect = 8.1, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 4 QKNNNNLELTSPKSILNDKWDVVLSNMLVK-TGLGFG-----VGVVTSILLFKRR 52
Q+ + N+E+ S+ + WDVVLS + TG FG +G +T++ + RR
Sbjct: 37 QRLSVNMEVREKFSLRDQSWDVVLSCFGISFTGFFFGYDTGTIGGITNMQAWLRR 91
Database: Seq/AA.fsa
Posted date: Aug 24, 2012 3:22 PM
Number of letters in database: 53,481,399
Number of sequences in database: 114,666
Lambda K H
0.321 0.139 0.414
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 114666 Number of Hits to DB: 9,032,149 Number of extensions: 300949 Number of successful extensions: 912 Number of sequences better than 10.0: 27 Number of HSP's gapped: 912 Number of HSP's successfully gapped: 27 Length of query: 86 Length of database: 53,481,399 Length adjustment: 58 Effective length of query: 28 Effective length of database: 46,830,771 Effective search space: 1311261588 Effective search space used: 1311261588 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)